Bacterial virus anti-defence systems · sequence & structure resource

Encyclopaedia of Bacterial Virus Anti-Defence Systems


Protein: AcrIIA15

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Overview

Mode of Action (MoA) binds to Cas9, blocking the PAM recognition sites.
Evidence AcrIIA15 was also identified by guilt-by-association with genes adjacent to the same aca-like region. AcrIIA15 was cloned and expressed in TXTL, where it restored GFP expression in the presence of SauCas9 (ECO_0000017). In vitro, AcrIIA15 inhibited SauCas9 cleavage only when added prior to sgRNA, indicating it blocks RNP formation by binding Cas9 before guide RNA association. RNA EMSA confirmed it disrupted RNP formation, and DNA EMSA showed inhibition of target binding if added early (ECO_0001807). The C-terminal domain alone retained inhibitory activity, while the N-terminal HTH domain was dispensable for Cas9 inhibition.
MoA Category binds and inhibits host defence system
Subtype(s) of the defence system(s) inhibited by the protein Defence Subtype Staphylococcus aureus type II-A CRISPR-Cas
Relevant publication(s) DOI 10.1073/pnas.1917668117
Other components of the anti-defence system Multicomponent System -
Known structure in PDB PDB ID 8JFO_B
Genome(s) encoding the protein Protein Source MGE in Staphylococcus delphini
Defence system(s) inhibited by the protein Defences CRISPR-Cas

3D structure

PDB entry model.

A similar PDB structure exists: 8JFO_B

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Feature viewer - predicted secondary structure

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Pfam annotations

No Pfam domains found

Sequence Viewer

Amino acid position: -

MRKTIERLLNSELSSNSIAVRTGVSQAVISKLRNGKKELGNLTLNSAEKLFEYQKEMEKVDTWIVYRGRTADMNKSYIAEGSTYEEVYNNFVDKYGYDVLDEDIYEIQLLKKNGENLDDYDVDSDGINNYDKLDEFRESDYVDLEDYDYRELFENSSSQVYYHEFEITHE