Bacterial virus anti-defence systems · sequence & structure resource

Encyclopaedia of Bacterial Virus Anti-Defence Systems


Protein: mga47 (DNA polymerase)

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Overview

Mode of Action (MoA) mutated DNA polymerase capable of replicating DNA modified (ADP-ribosylated) by the host DarTG system.
Evidence SECϕ18 phages were serially passaged on E. coli cells containing DarTG2 to select for escape mutants, mutations in mga47 were found in resistant phages. Overexpression of mga47 (wild-type and mutant) showed it does not trigger DarT2 activity. ELTA assays demonstrated that even in presence of mutant mga47, DarT2 was still active and ADP-ribosylated phage DNA, suggesting the polymerase mutations allowed phage to tolerate or bypass DarT2’s modification (ECO_0005801).
MoA Category uncategorised
Subtype(s) of the defence system(s) inhibited by the protein Defence Subtype Escherichia coli type IV TA system DarTG
Relevant publication(s) DOI 10.1038/s41564-022-01153-5
Other components of the anti-defence system Multicomponent System -
Known structure in PDB PDB ID -
Genome(s) encoding the protein Protein Source Phage SECϕ18
Defence system(s) inhibited by the protein Defences TA

3D structure

AlphaFold 3 model.

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Feature viewer - predicted secondary structure

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Pfam annotations

Pfam Name Pfam Acc Pfam Length Colour HMM Start HMM End Ali Start Ali End Env Start Env End Evalue
DNA_pol_A PF00476 381 138 225 393 482 387 505 2.8e-18

Sequence Viewer

Amino acid position: -

MKDFERLFLDTETFSDVGLKKVGAYAYAEHPSTEIMICTYAIDEGRVQTWDATESPTMPRELRKALRRVSRKKAKIVMANGLLFDRLVIREKWGIDLPVSQIEDTMIMAFRHALPGSLDMQCQVLGVDAEHAKDKAGKALIKRFCKPTPKTYKIRRYTRETHPEEWAKFLRYAALDIVAMREVYWRIPDWGNSPKEDEILLIDQIINDRGFYVDVDLANAAIKAVRAHKEELKEEAWERFGGKLTGNDFLPILRDIAPAFTIHNAQKSTLNDLLEDPDFPDEGKALIEMRLGASSTASTKYNPLVNGLSADGRRRGCIQYGGAKRTLRWAGKGFQPQNLARGEYSDDHEGKIKRREGESDVSFWVRSHMLTNGINSLLRGTAHWAYDISKLTASTVRGCIIPAKGKKFVVADYSNVEGRGLAWIAGEKTALMVFKAGRDIYCETAGKMFGLDPDYIKANRKDLRQIGKACELGLGYGGGVAAFLQFAKNLGLDLYTMADVMKGTFPDHIWAAAKRGYEYARINEAKRPPKPGKKDERPTYILPKNVWLTCDAIKRMWREAHPKTVAFWAELEDAVLCAIRNPGKAYWAGANVRPDGRKALKIVRTKAKHDPTFDEERDDPNAAGWWLKIELPSGRIMSYPGIALSVTTEIDEDTGKKRTSTRIKYQGENQTTRQWGFQYTYGGKLTENIVQALCRDILAWSMPGVEAAGYEIVLSVHDELVTEVPDTDDYTTEELCALMCDLPIWAKGFPLAAEGDCMYRYRK