Bacterial virus anti-defence systems · sequence & structure resource

Encyclopaedia of Bacterial Virus Anti-Defence Systems


Protein: SAM-AMP lyase

Download all data for this protein (.zip)

Overview

Mode of Action (MoA) cleaves the signalling molecule SAM-AMP used by type III CRISPR systems
Evidence DAN18478 was identified as a candidate phage-encoded SAM-AMP lyase from a human microbiome viral metagenome. It was recombinantly expressed in E. coli and purified to near-homogeneity. The purified protein exhibited SAM-AMP lyase activity, producing MTA-AMP. The phage enzyme functionally substituted for C. botulinum SAM-AMP lyase in a plasmid interference assay involving the B. fragilis Cmr/CorA type III CRISPR system, supporting its functional role in neutralizing CRISPR immunity.
MoA Category degrades or sequesters molecules utilised by host defence systems
Subtype(s) of the defence system(s) inhibited by the protein Defence Subtype None
Relevant publication(s) DOI 10.1093/nar/gkaf655
Other components of the anti-defence system Multicomponent System -
Known structure in PDB PDB ID -
Genome(s) encoding the protein Protein Source Metagenome
Defence system(s) inhibited by the protein Defences CRISPR-Cas

3D structure

AlphaFold 3 model.

Download structure file

Feature viewer - predicted secondary structure

Download features JSON file

Pfam annotations

No Pfam domains found

Sequence Viewer

Amino acid position: -

MTIQEKIKKTGEGKYKIKFSTIKRYSIEFGRTVTDYYFVEYKNNTFITETPFILLKNFGDNFSKDGSGAGYCSEIVSCERYFRENEYKNQNSRTQEFKLVIGINQGYNHNNDSSINIYELYQEVAEKIYQKYGTYISATITESKVIYSASWGCPAGGEIVYSIKGTKNPQFVDDFEKYKKATERVAKTLASELKQSTFTLTWKNLELNYFKKIDGSCK